[INFO] fetching crate seq_geom_parser 1.1.0...
[INFO] testing seq_geom_parser-1.1.0 against master#1f7f8ea0721a3b1eb73e6c6d25cccb371434b320 for pr-154065-1
[INFO] extracting crate seq_geom_parser 1.1.0 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate seq_geom_parser 1.1.0
[INFO] finished tweaking crates.io crate seq_geom_parser 1.1.0
[INFO] tweaked toml for crates.io crate seq_geom_parser 1.1.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate seq_geom_parser 1.1.0 on toolchain 1f7f8ea0721a3b1eb73e6c6d25cccb371434b320
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate seq_geom_parser 1.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded chumsky v0.12.0
[INFO] [stderr]   Downloaded regex-automata v0.3.9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4bf39b063668bf92bb913d38ba37fa5db2be6d0c5e7ad8dad75e8bfcba5a5d1e
[INFO] running `Command { std: "docker" "start" "-a" "4bf39b063668bf92bb913d38ba37fa5db2be6d0c5e7ad8dad75e8bfcba5a5d1e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4bf39b063668bf92bb913d38ba37fa5db2be6d0c5e7ad8dad75e8bfcba5a5d1e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4bf39b063668bf92bb913d38ba37fa5db2be6d0c5e7ad8dad75e8bfcba5a5d1e", kill_on_drop: false }`
[INFO] [stdout] 4bf39b063668bf92bb913d38ba37fa5db2be6d0c5e7ad8dad75e8bfcba5a5d1e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 127d1d7794796bdec8f440b2cd19752f968918f1420fab112f526dfb6cf09408
[INFO] running `Command { std: "docker" "start" "-a" "127d1d7794796bdec8f440b2cd19752f968918f1420fab112f526dfb6cf09408", kill_on_drop: false }`
[INFO] [stderr]    Compiling object v0.37.3
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling cc v1.2.57
[INFO] [stderr]    Compiling ariadne v0.5.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
[INFO] [stderr]    Compiling quote v1.0.45
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling stacker v0.1.23
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling ar_archive_writer v0.5.1
[INFO] [stderr]    Compiling psm v0.1.30
[INFO] [stderr]    Compiling chumsky v0.12.0
[INFO] [stderr]    Compiling seq_geom_parser v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 14.19s
[INFO] running `Command { std: "docker" "inspect" "127d1d7794796bdec8f440b2cd19752f968918f1420fab112f526dfb6cf09408", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "127d1d7794796bdec8f440b2cd19752f968918f1420fab112f526dfb6cf09408", kill_on_drop: false }`
[INFO] [stdout] 127d1d7794796bdec8f440b2cd19752f968918f1420fab112f526dfb6cf09408
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8aa23caa87d484d251a1c761e6e69225aa400ab914c52a41e40191f005c7bd78
[INFO] running `Command { std: "docker" "start" "-a" "8aa23caa87d484d251a1c761e6e69225aa400ab914c52a41e40191f005c7bd78", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling zerocopy v0.8.42
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling object v0.37.3
[INFO] [stderr]    Compiling clap_builder v4.6.0
[INFO] [stderr]    Compiling is-terminal v0.4.17
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling clap v4.6.0
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling zerocopy-derive v0.8.42
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling ar_archive_writer v0.5.1
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling psm v0.1.30
[INFO] [stderr]    Compiling stacker v0.1.23
[INFO] [stderr]    Compiling chumsky v0.12.0
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling half v2.7.1
[INFO] [stderr]    Compiling ciborium-ll v0.2.2
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling seq_geom_parser v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling criterion v0.5.1
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 19.76s
[INFO] running `Command { std: "docker" "inspect" "8aa23caa87d484d251a1c761e6e69225aa400ab914c52a41e40191f005c7bd78", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8aa23caa87d484d251a1c761e6e69225aa400ab914c52a41e40191f005c7bd78", kill_on_drop: false }`
[INFO] [stdout] 8aa23caa87d484d251a1c761e6e69225aa400ab914c52a41e40191f005c7bd78
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 4761fad9479de090881b5513c0992817aec69721a683f1e14b68a8fc94b82870
[INFO] running `Command { std: "docker" "start" "-a" "4761fad9479de090881b5513c0992817aec69721a683f1e14b68a8fc94b82870", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/seq_geom_parser-bb6da5c59da8d09d)
[INFO] [stdout] 
[INFO] [stdout] running 39 tests
[INFO] [stdout] test extract::tests::boundary_resolved_prefers_leftmost_best_anchor ... ok
[INFO] [stdout] test extract::tests::extract_chromium_v3 ... ok
[INFO] [stdout] test extract::tests::extract_flex_v1 ... ok
[INFO] [stdout] test extract::tests::extract_boundary_resolved_prefix_read_and_suffix_barcode ... ok
[INFO] [stdout] test extract::tests::extract_flex_v2_exact_anchor ... ok
[INFO] [stdout] test extract::tests::extract_flex_v2_anchor_not_found ... ok
[INFO] [stdout] test extract::tests::extract_flex_v2_no_gap ... ok
[INFO] [stdout] test extract::tests::extract_variable_barcode_with_anchor ... ok
[INFO] [stdout] test extract::tests::general_extractor_does_not_return_truncated_fields ... ok
[INFO] [stdout] test extract::tests::hamming_distance_short_circuits_past_limit ... ok
[INFO] [stdout] test extract::tests::extract_hamming_tolerance ... ok
[INFO] [stdout] test extract::tests::hamming_distance_test ... ok
[INFO] [stdout] test normalize::tests::needs_padding_check ... ok
[INFO] [stdout] test extract::tests::variable_umi_sets_normalization_metadata ... ok
[INFO] [stdout] test normalize::tests::no_collisions_across_lengths ... ok
[INFO] [stdout] test normalize::tests::normalized_len_check ... ok
[INFO] [stdout] test normalize::tests::pad_deficit_1 ... ok
[INFO] [stdout] test normalize::tests::pad_deficit_3 ... ok
[INFO] [stdout] test normalize::tests::pad_deficit_2 ... ok
[INFO] [stdout] test normalize::tests::pad_deficit_4 ... ok
[INFO] [stdout] test normalize::tests::pad_no_deficit ... ok
[INFO] [stdout] test normalize::tests::padbuf_reuse ... ok
[INFO] [stdout] test parse::tests::classify_fixed_vs_variable_complexity ... ok
[INFO] [stdout] test parse::tests::parse_boundary_resolved_unbounded ... ok
[INFO] [stdout] test parse::tests::parse_chromium_v3 ... ok
[INFO] [stdout] test parse::tests::error_message_quality ... ok
[INFO] [stdout] test parse::tests::parse_hamming_distance ... ok
[INFO] [stdout] test parse::tests::parse_fixed_sequence ... ok
[INFO] [stdout] test parse::tests::parse_flex_v1 ... ok
[INFO] [stdout] test parse::tests::validate_missing_barcode ... ok
[INFO] [stdout] test parse::tests::validate_missing_umi ... ok
[INFO] [stdout] test parse::tests::validate_range_too_wide ... ok
[INFO] [stdout] test parse::tests::validate_variable_length_barcode_without_anchor_rejected ... ok
[INFO] [stdout] test parse::tests::parse_flex_v2_with_anchor ... ok
[INFO] [stdout] test parse::tests::parse_numbered_barcodes ... ok
[INFO] [stdout] test parse::tests::validate_range_without_anchor ... ok
[INFO] [stdout] test parse::tests::validate_variable_length_barcode_with_anchor ... ok
[INFO] [stdout] test parse::tests::validate_boundary_segment_with_two_flexible_fields_rejected ... ok
[INFO] [stdout] test parse::tests::parse_hamming_with_space ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 39 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests seq_geom_parser
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test src/extract.rs - extract::CompiledGeom::extract (line 539) ... ignored
[INFO] [stdout] test src/normalize.rs - normalize (line 13) ... ok
[INFO] [stdout] test src/lib.rs - (line 74) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.16s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "4761fad9479de090881b5513c0992817aec69721a683f1e14b68a8fc94b82870", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4761fad9479de090881b5513c0992817aec69721a683f1e14b68a8fc94b82870", kill_on_drop: false }`
[INFO] [stdout] 4761fad9479de090881b5513c0992817aec69721a683f1e14b68a8fc94b82870
